dev-python/numpy: Bump to 2.3.3

Signed-off-by: Michał Górny <mgorny@gentoo.org>

2 files changed, 350 insertions, 0 deletions

diff --git a/dev-python/numpy/Manifest b/dev-python/numpy/Manifest
index cdd1ba1c2b2c..18f38419a41b 100644
--- a/dev-python/numpy/Manifest
+++ b/dev-python/numpy/Manifest
@@ -2,3 +2,4 @@ DIST numpy-1.26.4.tar.gz 15786129 BLAKE2B ee759d3a857111bc494d5e989a7b005375d942
 DIST numpy-2.2.6.tar.gz 20276440 BLAKE2B 597ebbc72b2b3901bba4e0946f4f63ff13baf3b04d2f44d6e1ce8d05112f5d7191cb2e2f80e20006f0bc57a5a3f395fcc6003d9593e41b057394c12ad44f69f7 SHA512 00c82476c6cc8e68c4cd3210896172d91bdb52a46676931d173a3bbd772b29cebc8e819dfbbaf621eba9225fff3fa3f81426fe864d8812de4ff2975e7ac5c338
 DIST numpy-2.3.1.tar.gz 20390372 BLAKE2B a52f39f8b7e4cf75bed3bbf32b92be7d118c7bab0b3cdbb1428b24daf71d4813641ade390bb20848156fc0ead3768383f272b755d130fb36348859b8c435c954 SHA512 aedb917cc6d8fcb923edb5b32e8b84bddb31fcf0159cfbda88b7ea9a5bc9e0ef58f27391746c6e9140777daf928c3e9de2a73758555130e5c00725d7082f7c2a
 DIST numpy-2.3.2.tar.gz 20489306 BLAKE2B 66a683a62daf3971c01a484d6e8c56e592744b93ec2648b61246d9969b02c62256153fb7c643002d7f82ebf1bfd5c9f34c14449b9daf85007e6cb854e97852dd SHA512 8f315a681704f1a18712828b5b9d5cd602576230fb08ff00c293ce129656faa49c9e01a446989dbd4d678166975432b531915e4838be66655ead1f0fc05be861
+DIST numpy-2.3.3.tar.gz 20576648 BLAKE2B 285c3ea4852618c9a7af339f117b12e06c736a765c6b97437ac8b2c0c02085126a89cc8d6d9e0e6f7d5ebb69d63a972c1619bf6c407197882e01c7cddfb8d79b SHA512 5555f68d75342054c240695a7a7aaaaec09c45e04965b4100732a7f8f49f53a203ec438e35c12040481d6ee9f4649e43c83ac96fdc08526cdcf93463b9fe7bd9
diff --git a/dev-python/numpy/numpy-2.3.3.ebuild b/dev-python/numpy/numpy-2.3.3.ebuild
new file mode 100644
index 000000000000..c11582e95608
--- /dev/null
+++ b/dev-python/numpy/numpy-2.3.3.ebuild
@@ -0,0 +1,349 @@
+# Copyright 1999-2025 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_EXT=1
+DISTUTILS_USE_PEP517=meson-python
+PYTHON_COMPAT=( python3_{11..14} pypy3_11 )
+PYTHON_REQ_USE="threads(+)"
+FORTRAN_NEEDED=lapack
+
+inherit distutils-r1 flag-o-matic fortran-2 pypi
+
+DESCRIPTION="Fast array and numerical python library"
+HOMEPAGE="
+	https://numpy.org/
+	https://github.com/numpy/numpy/
+	https://pypi.org/project/numpy/
+"
+
+LICENSE="BSD"
+SLOT="0/2"
+KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~loong ~m68k ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86"
+# +lapack because the internal fallbacks are pretty slow. Building without blas
+# is barely supported anyway, see bug #914358.
+IUSE="big-endian +cpudetection +lapack"
+
+# upstream-flag[:gentoo-flag]
+ARM_FLAGS=( neon{,-fp16} vfpv4 asimd{,hp,dp,fhm} sve )
+PPC_FLAGS=( vsx vsx2 vsx3 vsx4 )
+X86_FLAGS=(
+	sse{,2,3,4_1,4_2} ssse3 popcnt avx{,2} xop fma{3,4}
+	f16c avx512{f,cd,pf,er,dq,bw,vl,ifma,vbmi}
+	avx512_{vpopcntdq,4vnniw,4fmaps,vbmi2,bitalg,fp16,vnni}
+)
+IUSE+="
+	${ARM_FLAGS[*]/#/cpu_flags_arm_}
+	${PPC_FLAGS[*]/#/cpu_flags_ppc_}
+	${X86_FLAGS[*]/#/cpu_flags_x86_}
+"
+
+RDEPEND="
+	lapack? (
+		>=virtual/cblas-3.8
+		>=virtual/lapack-3.8
+	)
+"
+BDEPEND="
+	${RDEPEND}
+	>=dev-build/meson-1.5.2
+	>=dev-python/cython-3.0.6[${PYTHON_USEDEP}]
+	lapack? (
+		virtual/pkgconfig
+	)
+	test? (
+		$(python_gen_cond_dep '
+			>=dev-python/cffi-1.14.0[${PYTHON_USEDEP}]
+		' 'python*')
+		dev-python/charset-normalizer[${PYTHON_USEDEP}]
+		>=dev-python/pytz-2019.3[${PYTHON_USEDEP}]
+	)
+"
+
+QA_CONFIG_IMPL_DECL_SKIP=(
+	# https://bugs.gentoo.org/925367
+	vrndq_f32
+)
+
+EPYTEST_PLUGINS=( hypothesis pytest-timeout )
+EPYTEST_XDIST=1
+distutils_enable_tests pytest
+
+PATCHES=(
+	# https://github.com/numpy/numpy/pull/29459
+	"${FILESDIR}"/${PN}-2.3.2-no-detect.patch
+	# https://github.com/numpy/numpy/pull/29579
+	"${FILESDIR}"/${PN}-2.3.2-arm-asimddp.patch
+)
+
+has_all_x86() {
+	local flag
+	for flag; do
+		if ! use "cpu_flags_x86_${flag}"; then
+			return 1
+		fi
+	done
+	return 0
+}
+
+python_configure_all() {
+	local cpu_baseline=()
+	local map flag
+	case ${ARCH} in
+		arm)
+			# every flag implies the previous one
+			for map in NEON:neon NEON_FP16:neon-fp16 NEON_VFPV4:vfpv4; do
+				if ! use "cpu_flags_arm_${map#*:}"; then
+					break
+				fi
+				cpu_baseline+=( "${map%:*}" )
+			done
+			;&
+		arm64)
+			# on 32-bit ARM, ASIMD implies all NEON* flags
+			# on 64-bit ARM, they are all linked together
+			if use arm64 ||
+				[[ ${cpu_baseline[@]} && ${cpu_baseline[-1]} == NEON_VFPV4 ]]
+			then
+				cpu_baseline+=( $(usev cpu_flags_arm_asimd ASIMD) )
+			fi
+
+			# these two imply ASIMD
+			if [[ ${cpu_baseline[@]} && ${cpu_baseline[-1]} == ASIMD ]]; then
+				for flag in dp hp; do
+					cpu_baseline+=(
+						$(usev "cpu_flags_arm_asimd${flag}" "ASIMD${flag^^}")
+					)
+				done
+			fi
+
+			# these two imply ASIMDHP
+			if [[ ${cpu_baseline[@]} && ${cpu_baseline[-1]} == ASIMDHP ]]; then
+				for flag in asimdfhm sve; do
+					cpu_baseline+=(
+						$(usev "cpu_flags_arm_${flag}" "${flag^^}")
+					)
+				done
+			fi
+			;;
+		ppc64)
+			# every flag implies the previous one
+			for flag in '' 2 3 4; do
+				if ! use "cpu_flags_ppc_vsx${flags}"; then
+					break
+				fi
+				cpu_baseline+=( "VSX${flag}" )
+			done
+			;;
+		amd64|x86)
+			# every flag implies the previous one
+			for flag in sse{,2,3} ssse3 sse4_1 popcnt sse4_2 avx; do
+				if ! use "cpu_flags_x86_${flag}"; then
+					break
+				fi
+				flag=${flag/_}
+				cpu_baseline+=( "${flag^^}" )
+			done
+
+			# these imply AVX
+			if [[ ${cpu_baseline[@]} && ${cpu_baseline[-1]} == AVX ]]; then
+				for flag in xop fma4 f16c; do
+					if use "cpu_flags_x86_${flag}"; then
+						cpu_baseline+=( "${flag^^}" )
+					fi
+				done
+			fi
+
+			# another chain started on implying F16C
+			if [[ ${cpu_baseline[@]} && ${cpu_baseline[-1]} == F16C ]]; then
+				for flag in fma3 avx2 avx512f avx512cd; do
+					if ! use "cpu_flags_x86_${flag}"; then
+						break
+					fi
+					cpu_baseline+=( "${flag^^}" )
+				done
+			fi
+
+			if [[ ${cpu_baseline[@]} && ${cpu_baseline[-1]} == AVX512CD ]]; then
+				# upstream combines multiple instructions into per-CPU sets
+				local -A avx512_mapping=(
+					[AVX512_KNL]="avx512pf avx512er"
+					[AVX512_KNM]="avx512_vpopcntdq avx512_4vnniw avx512_4fmaps"
+					[AVX512_SKX]="avx512dq avx512bw avx512vl"
+					[AVX512_CLX]="avx512_vnni"
+					[AVX512_CNL]="avx512ifma avx512vbmi"
+					[AVX512_ICL]="avx512_vbmi2 avx512_bitalg"
+					[AVX512_SPR]="avx512_fp16"
+				)
+
+				# 1. AVX512CD -> AVX512_KNL -> AVX512_KNM
+				if has_all_x86 ${avx512_mapping[AVX512_KNL]}; then
+					cpu_baseline+=( AVX512_KNL )
+					if has_all_x86 ${avx512_mapping[AVX512_KNM]}; then
+						cpu_baseline+=( AVX512_KNM )
+					fi
+				fi
+				# 2. AVX512CD -> AVX512_SKX -> [AVX512_CLX, AVX512_CNL]
+				if has_all_x86 ${avx512_mapping[AVX512_SKX]}; then
+					cpu_baseline+=( AVX512_SKX )
+					if has_all_x86 ${avx512_mapping[AVX512_CLX]}; then
+						cpu_baseline+=( AVX512_CLX )
+					fi
+					if has_all_x86 ${avx512_mapping[AVX512_CNL]}; then
+						cpu_baseline+=( AVX512_CNL )
+					fi
+				fi
+				# 3. [AVX512_CLX, AVX512_CNL] -> AVX512_ICL -> AVX512_SPR
+				if [[ ${cpu_baseline[-1]} == AVX512_CNL &&
+					${cpu_baseline[-2]} == AVX512_CLX ]]
+				then
+					if has_all_x86 ${avx512_mapping[AVX512_ICL]}; then
+						cpu_baseline+=( AVX512_ICL )
+						if has_all_x86 ${avx512_mapping[AVX512_SPR]}; then
+							cpu_baseline+=( AVX512_SPR )
+						fi
+					fi
+				fi
+			fi
+			;;
+		*)
+			cpu_baseline=MIN
+			;;
+	esac
+
+	DISTUTILS_ARGS=(
+		-Dallow-noblas=$(usex !lapack true false)
+		-Dblas=$(usev lapack cblas)
+		-Dlapack=$(usev lapack lapack)
+		-Dcpu-baseline="${cpu_baseline[*]}"
+		-Dcpu-baseline-detect=disabled
+		# '-XOP -FMA4' is upstream default, since these are deprecated
+		-Dcpu-dispatch="$(usev cpudetection 'MAX -XOP -FMA4')"
+	)
+
+	# bug #922457
+	filter-lto
+	# https://github.com/numpy/numpy/issues/25004
+	append-flags -fno-strict-aliasing
+}
+
+python_test() {
+	# don't run tests that require more than 2 GiB of RAM (per process)
+	local -x NPY_AVAILABLE_MEM="2 GiB"
+
+	local EPYTEST_DESELECT=(
+		# Very disk-and-memory-hungry
+		numpy/lib/tests/test_io.py::TestSavezLoad::test_closing_fid
+		numpy/lib/tests/test_io.py::TestSavezLoad::test_closing_zipfile_after_load
+
+		# Precision problems
+		numpy/_core/tests/test_umath_accuracy.py::TestAccuracy::test_validate_transcendentals
+
+		numpy/typing/tests/test_typing.py
+
+		# Flaky, reruns don't help
+		numpy/f2py/tests/test_crackfortran.py
+		numpy/f2py/tests/test_f2py2e.py::test_gh22819_cli
+		numpy/f2py/tests/test_data.py::TestData{,F77}::test_crackedlines
+	)
+
+	if [[ $(uname -m) == armv8l ]]; then
+		# Degenerate case of arm32 chroot on arm64, bug #774108
+		EPYTEST_DESELECT+=(
+			numpy/_core/tests/test_cpu_features.py::Test_ARM_Features::test_features
+		)
+	fi
+
+	case ${ARCH} in
+		arm)
+			EPYTEST_DESELECT+=(
+				# TODO: warnings
+				numpy/_core/tests/test_umath.py::TestSpecialFloats::test_unary_spurious_fpexception
+
+				# TODO
+				numpy/_core/tests/test_function_base.py::TestLinspace::test_denormal_numbers
+				numpy/f2py/tests/test_kind.py::TestKind::test_real
+				numpy/f2py/tests/test_kind.py::TestKind::test_quad_precision
+
+				# require too much memory
+				'numpy/_core/tests/test_multiarray.py::TestDot::test_huge_vectordot[complex128]'
+				'numpy/_core/tests/test_multiarray.py::TestDot::test_huge_vectordot[float64]'
+			)
+			;;
+		hppa)
+			EPYTEST_DESELECT+=(
+				# https://bugs.gentoo.org/942689
+				"numpy/_core/tests/test_dtype.py::TestBuiltin::test_dtype[int]"
+				"numpy/_core/tests/test_dtype.py::TestBuiltin::test_dtype[float]"
+				"numpy/_core/tests/test_dtype.py::TestBuiltin::test_dtype_bytes_str_equivalence[datetime64]"
+				"numpy/_core/tests/test_dtype.py::TestBuiltin::test_dtype_bytes_str_equivalence[timedelta64]"
+				"numpy/_core/tests/test_dtype.py::TestBuiltin::test_dtype_bytes_str_equivalence[<f]"
+				"numpy/_core/tests/test_dtype.py::TestPickling::test_pickle_dtype[dt28]"
+				numpy/f2py/tests/test_kind.py::TestKind::test_real
+				numpy/f2py/tests/test_kind.py::TestKind::test_quad_precision
+				numpy/tests/test_ctypeslib.py::TestAsArray::test_reference_cycles
+				numpy/tests/test_ctypeslib.py::TestAsArray::test_segmentation_fault
+				numpy/tests/test_ctypeslib.py::TestAsCtypesType::test_scalar
+				numpy/tests/test_ctypeslib.py::TestAsCtypesType::test_subarray
+				numpy/tests/test_ctypeslib.py::TestAsCtypesType::test_structure
+				numpy/tests/test_ctypeslib.py::TestAsCtypesType::test_structure_aligned
+				numpy/tests/test_ctypeslib.py::TestAsCtypesType::test_union
+				numpy/tests/test_ctypeslib.py::TestAsCtypesType::test_padded_union
+			)
+			;;
+		ppc|x86)
+			EPYTEST_DESELECT+=(
+				# require too much memory
+				'numpy/_core/tests/test_multiarray.py::TestDot::test_huge_vectordot[complex128]'
+				'numpy/_core/tests/test_multiarray.py::TestDot::test_huge_vectordot[float64]'
+			)
+			;;
+	esac
+
+	if [[ ${CHOST} == powerpc64le-* ]]; then
+		EPYTEST_DESELECT+=(
+			# long double thingy
+			numpy/_core/tests/test_scalarprint.py::TestRealScalars::test_ppc64_ibm_double_double128
+		)
+	fi
+
+	if use big-endian; then
+		EPYTEST_DESELECT+=(
+			# ppc64 and sparc
+			numpy/linalg/tests/test_linalg.py::TestDet::test_generalized_sq_cases
+			numpy/linalg/tests/test_linalg.py::TestDet::test_sq_cases
+			"numpy/f2py/tests/test_return_character.py::TestFReturnCharacter::test_all_f77[s1]"
+			"numpy/f2py/tests/test_return_character.py::TestFReturnCharacter::test_all_f77[t1]"
+			"numpy/f2py/tests/test_return_character.py::TestFReturnCharacter::test_all_f90[s1]"
+			"numpy/f2py/tests/test_return_character.py::TestFReturnCharacter::test_all_f90[t1]"
+		)
+	fi
+
+	if ! has_version -b "~${CATEGORY}/${P}[${PYTHON_USEDEP}]" ; then
+		# depends on importing numpy.random from system namespace
+		EPYTEST_DESELECT+=(
+			'numpy/random/tests/test_extending.py::test_cython'
+		)
+	fi
+
+	if has_version ">=dev-python/setuptools-74[${PYTHON_USEDEP}]"; then
+		# msvccompiler removal
+		EPYTEST_DESELECT+=(
+			numpy/tests/test_public_api.py::test_all_modules_are_expected_2
+			numpy/tests/test_public_api.py::test_api_importable
+		)
+		EPYTEST_IGNORE+=(
+			numpy/distutils/tests/test_mingw32ccompiler.py
+			numpy/distutils/tests/test_system_info.py
+		)
+	fi
+
+	cd "${BUILD_DIR}/install$(python_get_sitedir)" || die
+	epytest
+}
+
+python_install_all() {
+	local DOCS=( LICENSE.txt README.md THANKS.txt )
+	distutils-r1_python_install_all
+}